i have a similar slight drop on the drivers side, but i left it alone as it didn't create an issue with the latch and it worked better with the hard top gasket. As the door closes it moves up and seals the gasket. On the passenger side my door was good but i ruined the gasket soon after i put the hard top on because it was too tight vertically. I actually have pondered reversing the inner door frames and hinging at the front, but, not on this project. Maybe the mkiihr will have better doors. Leave room for suicide safety latches while your in door mode also...